Providence research from Washington locations.

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Submissions from 2021

Heart and Kidney Benefits with GLP-1 Receptor Agonists: Where Do They Fit in the Therapeutic Armamentarium?, Katherine Tuttle

Managing Sodium-Glucose Cotransporter 2 Inhibitors with Other Diabetes Agents, Diuretics and Heart Failure Drugs, Katherine Tuttle

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Perspective; Finerenone shows HF benefit in mild to moderate diabetic kidney disease: FIGARO-DKD, Katherine Tuttle

Putting It Together: A Whole Person Approach to Diabetes, Katherine Tuttle

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Therapeutic Transformation for Patients with Diabetes and CKD, Katherine Tuttle

Updates to Care: Diabetes and Kidney Disease, Katherine Tuttle

Upping the Game: Optimizing Medication Management in CKD, Katherine Tuttle

Who, What, and Where for Newer Drugs for Diabetic Kidney Disease, Katherine Tuttle

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Clinicopathological Characteristics of Adult Patients in the United States with Focal Segmental Glomerulosclerosis (FSGS), Katherine Tuttle, Clint Abner, Kerime Ararat, Patrick D. Walker, Amin Yakubu, and Martin C. Bunke

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Patient perspectives and involvement in precision medicine research., Katherine Tuttle, Jack Bebiak, Keith Brown, Catherine Campbell, Ashveena Dighe, Lynda Hyashi, Nichole Jefferson, Glenda V Roberts, Christy Stutzke, Richard Knight, and Kidney Precision Medicine Project

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Therapeutic transformation for diabetic kidney disease., Katherine Tuttle and David Z I Cherney

Contemporary CKD incidence rates in adults with diabetes by race/ethnicity, sex, and age, Katherine Tuttle, CR Jones, Kenn Daratha, Radica Alicic, and See full list of authors in comments

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Breaking New Ground with Incretin Therapy in Diabetes., Katherine R Tuttle

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Glycemic Variability and KIM-1-Induced Inflammation in the Diabetic Kidney., Katherine R Tuttle and Radica Z Alicic

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Clinical Outcomes by Albuminuria Status with Dulaglutide versus Insulin Glargine in Participants with Diabetes and CKD: AWARD-7 Exploratory Analysis., Katherine Tuttle, Brian Rayner, Mark C Lakshmanan, Anita Y M Kwan, Manige Konig, Linda Shurzinske, and Fady T Botros

Clinicopathological Characteristics of Adult Patients in the United States with Focal Segmental Glomerulosclerosis (FSGS), Katherine Tuttle and See full list of authors in comments

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The impact of obesity on minimally invasive colorectal surgery: A report from the Surgical Care Outcomes Assessment Program collaborative., Kenley R Unruh, Amir Bastawrous, Jennifer A Kaplan, Ravi Moonka, Laila Rashidi, and Vlad V Simianu

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Slow Progress in Mental and Behavioral Health, but Far More Is Needed, Jürgen Unützer, Arpan Waghray, and Tyler Norris

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Facebook Live: 2021 Digital Opportunities and Priorities for Health Systems, Sara Vaezy and Matt Cohlima

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Facebook Live: Innovation at Scale - Lessons learned from the industry’s first Chief Digital Officer, Sara Vaezy and Aaron Martin

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Correction for Vangay et al., "Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities"., Pajau Vangay, Josephine Burgin, Anjanette Johnston, Kristen L Beck, Daniel C Berrios, Kai Blumberg, Shane Canon, Patrick Chain, John-Marc Chandonia, Danielle Christianson, Sylvain V Costes, Joan Damerow, William D Duncan, Jose Pablo Dundore-Arias, Kjiersten Fagnan, Jonathan M Galazka, Sean M Gibbons, David Hays, Judson Hervey, Bin Hu, Bonnie L Hurwitz, Pankaj Jaiswal, Marcin P Joachimiak, Linda Kinkel, Joshua Ladau, Stanton L Martin, Lee Ann McCue, Kayd Miller, Nigel Mouncey, Chris Mungall, Evangelos Pafilis, T B K Reddy, Lorna Richardson, Simon Roux, Lynn M Schriml, Justin P Shaffer, Jagadish Chandrabose Sundaramurthi, Luke R Thompson, Ruth E Timme, Jie Zheng, Elisha M Wood-Charlson, and Emiley A Eloe-Fadrosh

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Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities., Pajau Vangay, Josephine Burgin, Anjanette Johnston, Kristen L Beck, Daniel C Berrios, Kai Blumberg, Shane Canon, Patrick Chain, John-Marc Chandonia, Danielle Christianson, Sylvain V Costes, Joan Damerow, William D Duncan, Jose Pablo Dundore-Arias, Kjiersten Fagnan, Jonathan M Galazka, Sean M Gibbons, David Hays, Judson Hervey, Bin Hu, Bonnie L Hurwitz, Pankaj Jaiswal, Marcin P Joachimiak, Linda Kinkel, Joshua Ladau, Stanton L Martin, Lee Ann McCue, Kayd Miller, Nigel Mouncey, Chris Mungall, Evangelos Pafilis, T B K Reddy, Lorna Richardson, Simon Roux, Justin P Shaffer, Jagadish Chandrabose Sundaramurthi, Luke R Thompson, Ruth E Timme, Jie Zheng, Elisha M Wood-Charlson, and Emiley A Eloe-Fadrosh

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The Arabidopsis PeptideAtlas: Harnessing worldwide proteomics data to create a comprehensive community proteomics resource., Klaas J van Wijk, Tami Leppert, Qi Sun, Sascha S Boguraev, Zhi Sun, Luis Mendoza, and Eric W Deutsch

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Neurosurgery virtual education in the COVID-19 pandemic era: results of a global survey., Samantha Varela, Syed F Kazim, Meic H Schmidt, Bipin Chaurasia, Alis J Dicpinigaitis, Jonathan V Ogulnick, Kyril L Cole, Matthew Conlon, Omar Tarawneh, Rachel Thommen, Chad D Cole, Walter C Jean, William T Couldwell, Zachary Litvack, Fawaz Al-Mufti, and Christian A Bowers

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Bile acid synthesis, modulation, and dementia: A metabolomic, transcriptomic, and pharmacoepidemiologic study., Vijay R Varma, Youjin Wang, Yang An, Sudhir Varma, Murat Bilgel, Jimit Doshi, Cristina Legido-Quigley, João C Delgado, Anup M Oommen, Jackson A Roberts, Dean F Wong, Christos Davatzikos, Susan M Resnick, Juan C Troncoso, Olga Pletnikova, Richard O'Brien, Eelko Hak, Brenda N Baak, Ruth Pfeiffer, Priyanka Baloni, Siamak Mohmoudiandehkordi, Kwangsik Nho, Rima Kaddurah-Daouk, David A Bennett, Shahinaz M Gadalla, and Madhav Thambisetty

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COVID-19 as the cause of thrombosis: recognising COVID-19 infection in apparently asymptomatic patients., Kyle B Varner and Emily J Cox

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Pediatric Care Struggles of US Trained International Medical Graduate Pediatricians in COVID-19 Pandemic., Deepa Vasireddy, Srikrishna Varun Malayala, Paavani Atluri, and Deepika Gupta

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Single stage Xi® robotic radical nephroureterectomy for upper tract urothelial carcinoma: surgical technique and outcomes., Alessandro Veccia, Umberto Carbonara, Ithaar Derweesh, Reza Mehrazin, James R Porter, Firas Abdollah, Elio Mazzone, Chandru P Sundaram, Mark Gonzalgo, Riccardo Mastroianni, Alireza Ghoreifi, Giovanni E Cacciamani, Devin Patel, Jamil Marcus, Alyssa Danno, James Steward, Amit S Bhattu, Aeen Asghar, Adam C Reese, Zhenjie Wu, Robert G Uzzo, Andrea Minervini, Koon H Rha, Matteo Ferro, Vitaly Margulis, Lance J Hampton, Giuseppe Simone, Daniel D Eun, Hooman Djaladat, Alexandre Mottrie, and Riccardo Autorino

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Menopause: A Global Perspective and Clinical Guide for Practice., Amy J Voedisch, Rebecca Dunsmoor-Su, and Jennifer Kasirsky

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Iliac Screw Fixation Revisited: Improved Clinical and Radiologic Outcomes Using a Modified Iliac Screw Fixation Technique., Alexander von Glinski, Christopher Elia, James G Wiginton, Darius Ansari, Clifford Pierre, Basem Ishak, Emre Yilmaz, Ronen Blecher, Joseph R Dettori, Erik Hayman, Thomas A Schildhauer, Rod J Oskouian, and Jens R Chapman

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Surgical Management of Charcot Spinal Arthropathy in the Face of Possible Infection., Alexander von Glinski, Sven Frieler, Christopher J Elia, Darius Ansari, Clifford Pierre, Basem Ishak, Ronen Blecher, Bilal Qutteineh, Sarah Strot, Rod J Oskouian, and Jens R Chapman

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Risk Factors Associated with 90-day Readmissions Following Odontoid Fractures- A Nationwide Readmissions Database Study., Alexander von Glinski, Sven Frieler, Christopher Elia, Tye Patchana, Ariel Takayanagi, Varun Arvind, Clifford Pierre, Basem Ishak, Jens R Chapman, and Rod J Oskouian

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Fixation Strength of Modified Iliac Screw Trajectory Compared to Traditional Iliac and S2 Alar-Iliac Trajectories: A Cadaveric Study., Alexander Von Glinski, Clifford Pierre, Sven Frieler, Jonathan Mahoney, Jonathan Harris, Dhara Amin, May Allall, Brandon Bucklen, Thomas A Schildhauer, Rod J Oskouian, and Jens R Chapman

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Contrasting heat stress response patterns of coral holobionts across the Red Sea suggest distinct mechanisms of thermal tolerance., Christian R Voolstra, Jacob J Valenzuela, Serdar Turkarslan, Anny Cárdenas, Benjamin C C Hume, Gabriela Perna, Carol Buitrago-López, Katherine Rowe, Monica V Orellana, Nitin S Baliga, Suman Paranjape, Guilhem Banc-Prandi, Jessica Bellworthy, Maoz Fine, Sarah Frias-Torres, and Daniel J Barshis

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The viral hypothesis: how herpesviruses may contribute to Alzheimer's disease., Michael Wainberg, Tain Luquez, David M Koelle, Ben Readhead, Christine Johnston, Martin Darvas, and Cory C Funk

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Genetic program activity delineates risk, relapse, and therapy responsiveness in multiple myeloma., Matthew A Wall, Serdar Turkarslan, Wei-Ju Wu, Samuel A Danziger, David J Reiss, Mike J Mason, Andrew P Dervan, Matthew W B Trotter, Douglas Bassett, Robert M Hershberg, Adrián López García de Lomana, Alexander V Ratushny, and Nitin S Baliga

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Safety and Efficacy of GFB-887, a TRPC5 Channel Inhibitor, in Patients With Focal Segmental Glomerulosclerosis, Treatment-Resistant Minimal Change Disease, or Diabetic Nephropathy: TRACTION-2 Trial Design., Liron Walsh, John F Reilly, Caitlin Cornwall, Gregory A Gaich, Debbie S Gipson, Hiddo J L Heerspink, Leslie Johnson, Howard Trachtman, Katherine Tuttle, Youssef M K Farag, Krishna Padmanabhan, Xin-Ru Pan-Zhou, James R Woodworth, and Frank S Czerwiec

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Comparing accuracy of bedside ultrasound examination with physical examination for detection of pleural effusion., Michael H Walsh, Kang X Zhang, Emily J Cox, Justin M Chen, Nicholas G Cowley, Christopher J Oleynick, Leo M Smyth, and Irene W Y Ma

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Mid-Year Update., Jeffrey C Wang, Jens R Chapman, and Karsten Wiechert

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COVID-19 and the Future., Jeffrey C Wang, Karsten Wiechert, and Jens R Chapman

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A Guide to Creating a Gender-Affirming Environment Through a Community Lens Approach., Kevin S Wang, Max Sutherland, Alec W Gibson, Theodore Gobillot, Elizabeth Conley, and Kim Matsumoto

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Alzheimer's disease and progressive supranuclear palsy share similar transcriptomic changes in distinct brain regions., Xue Wang, Mariet Allen, Özkan İş, Joseph S Reddy, Frederick Q Tutor-New, Monica Castanedes Casey, Minerva M Carrasquillo, Stephanie R Oatman, Yuhao Min, Yan W Asmann, Cory C Funk, Thuy Nguyen, Charlotte Cg Ho, Kimberly G Malphrus, Nicholas T Seyfried, Allan I Levey, Steven G Younkin, Melissa E Murray, Dennis W Dickson, Nathan D Price, Todd E Golde, and Nilufer Ertekin-Taner

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Circulating activated immune cells as a potential blood biomarkers of non-small cell lung cancer occurrence and progression., Yingyi Wang, Na Zhou, Rui Zhu, Xiaoyuan Li, Zhao Sun, Yang Gao, Wei Liu, Changting Meng, Yuping Ge, Chunmei Bai, Taisheng Li, and Hongsheng Liu

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2021 Special Issue on Software Tools and Resources: Finding the Right Tools for the Job., Susan T Weintraub, Michael R Hoopmann, and Magnus Palmblad

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Assessment of Adult Spinal Deformity Complication Timing and Impact on Two-Year Outcomes Using a Comprehensive Adult Spinal Deformity Classification System., Joseph B Wick, Hai V Le, Renaud Lafage, Munish C Gupta, Robert A Hart, Gregory M Mundis, Shay Bess, Douglas C Burton, Christopher P Ames, Justin S Smith, Christopher I Shaffrey, Frank J Schwab, Peter G Passias, Themistocles S Protopsaltis, Virginie Lafage, Eric O Klineberg, and International Sp;ine Study Group

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GSJ Annual Survey 2021., Karsten Wiechert, Jens R Chapman, and Jeffrey C Wang

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Steps Explained: The Review Process of, Karsten Wiechert, Jens R Chapman, and Jeffrey C Wang

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Submitting Manuscripts but Not for Publication? Black Sheep Authors in Publishing., Karsten Wiechert, Jens R Chapman, and Jeffrey C Wang

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Ibrutinib Plus Venetoclax for First-Line Treatment of Chronic Lymphocytic Leukemia: Primary Analysis Results From the Minimal Residual Disease Cohort of the Randomized Phase II CAPTIVATE Study., William G Wierda, John N Allan, Tanya Siddiqi, Thomas J Kipps, Stephen Opat, Alessandra Tedeschi, Xavier C Badoux, Bryone J Kuss, Sharon Jackson, Carol Moreno, Ryan Jacobs, John M Pagel, Ian Flinn, Yvonne Pak, Cathy Zhou, Edith Szafer-Glusman, Joi Ninomoto, James P Dean, Danelle F James, Paolo Ghia, and Constantine S Tam

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CIDer: A Statistical Framework for Interpreting Differences in CID and HCD Fragmentation., Damien B Wilburn, Alicia L Richards, Danielle L Swaney, and Brian C Searle

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Author Correction: Gut microbiome pattern reflects healthy ageing and predicts survival in humans., Tomasz Wilmanski, Christian Diener, Noa Rappaport, Sushmita Patwardhan, Jack Wiedrick, Jodi Lapidus, John C Earls, Anat Zimmer, Gustavo Glusman, Max Robinson, James T Yurkovich, Deborah M Kado, Jane A Cauley, Joseph Zmuda, Nancy E Lane, Andrew T Magis, Jennifer C Lovejoy, Leroy Hood, Sean M Gibbons, Eric S Orwoll, and Nathan D Price

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Gut microbiome pattern reflects healthy ageing and predicts survival in humans., Tomasz Wilmanski, Christian Diener, Noa Rappaport, Sushmita Patwardhan, Jack Wiedrick, Jodi Lapidus, John C Earls, Anat Zimmer, Gustavo Glusman, Max Robinson, James T Yurkovich, Deborah M Kado, Jane A Cauley, Joseph Zmuda, Nancy E Lane, Andrew T Magis, Jennifer C Lovejoy, Leroy Hood, Sean M Gibbons, Eric S Orwoll, and Nathan D Price

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From taxonomy to metabolic output: what factors define gut microbiome health?, Tomasz Wilmanski, Noa Rappaport, Christian Diener, Sean M Gibbons, and Nathan D Price

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Minimally invasive thymectomy for myasthenia gravis favours left-sided approach and low severity class., Candice Wilshire, Sandra L Blitz, Carson C Fuller, Jens C Rückert, Feng Li, Robert J Cerfolio, Asem F Ghanim, Mark W Onaitis, Inderpal S Sarkaria, Dennis A Wigle, Vijay Joshi, Scott Reznik, Adam J Bograd, Eric Vallières, and Brian E Louie

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Clinical Evolution of Practice Patterns in the Management of Pleural Space Infections: A Community-based Healthcare Network Review., Candice Wilshire, Anee Sophia Jackson, Leah C Horslen, Joshua R Rayburn, Carson C Fuller, Christopher R Gilbert, Najib M Rahman, Eihab Bedawi, Adam J Bograd, Eric Vallieres, and Jed A Gorden

Distance between Indian health affiliated clinics and lung cancer screening sites suggest structural barriers in access to lung cancer screening in American Indian and Alaska Native communities in Washington State The American Thoracic Society San Diego, Californ, CL Wilshire

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Acute PR3-ANCA vasculitis in an asymptomatic COVID-19 teenager., Taylor Wintler, Monica Zherebtsov, Susanne Carmack, Rebecca Muntean, and Sarah J Hill

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Impact of clinical outcomes and imaging measures on health-related quality of life in secondary progressive MS., Marcus W Koch, Jop Mostert, P Repovic, James D Bowen, Eva Strijbis, Bernard Uitdehaag, and Gary Cutter

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Climate-smart and climate-ready health systems - the time is now, Jessica Wolff and Elizabeth Schenk

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Serum brain-derived neurotrophic factor remains elevated after long term follow-up of combat veterans with chronic post-traumatic stress disorder., Gwyneth W Y Wu, Owen M Wolkowitz, Victor I Reus, Jee In Kang, Mathea Elnar, Reuben Sarwal, Janine D Flory, Duna Abu-Amara, Rasha Hammamieh, Aarti Gautam, Francis J Doyle, Rachel Yehuda, Charles R Marmar, Marti Jett, Synthia H Mellon, SBPBC Collaborators, Leroy Hood, Kai Wang, and Inyoul Lee

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Improved gastrointestinal profile with diroximel fumarate is associated with a positive impact on quality of life compared with dimethyl fumarate: results from the randomized, double-blind, phase III EVOLVE-MS-2 study., Annette Wundes, Sibyl Wray, Ralf Gold, Barry A Singer, Elzbieta Jasinska, Tjalf Ziemssen, Jerome de Seze, P Repovic, Hailu Chen, Jerome Hanna, Jordan Messer, Catherine Miller, and Robert T Naismith

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A Preoperative Nomogram to Predict Renal Function Insufficiency for Cisplatin-based Adjuvant Chemotherapy Following Minimally Invasive Radical Nephroureterectomy (ROBUUST Collaborative Group)., Zhenjie Wu, Qi Chen, Hooman Djaladat, Andrea Minervini, Robert G Uzzo, Chandru P Sundaram, Koon H Rha, Mark L Gonzalgo, Reza Mehrazin, Elio Mazzone, Jamil Marcus, Alyssa Danno, James R Porter, Aeen Asghar, Fady Ghali, Georgi Guruli, Antoin Douglawi, Giovanni Cacciamani, Alireza Ghoreifi, Giuseppe Simone, Vitaly Margulis, Matteo Ferro, Riccardo Tellini, Andrea Mari, Abhishek Srivastava, James Steward, Ali Al-Qathani, Ahmad Al-Mujalhem, Amit Satish Bhattu, Alexander Mottrie, Firas Abdollah, Daniel D Eun, Ithaar Derweesh, Alessandro Veccia, Riccardo Autorino, and Linhui Wang

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Exploration of Lipid Metabolism in Gastric Cancer: A Novel Prognostic Genes Expression Profile., Zhen Xiong, Yao Lin, Yan Yu, Xianghui Zhou, Jun Fan, Colin J Rog, Kailin Cai, Zheng Wang, Zhijie Chang, Guobin Wang, Kaixiong Tao, and Ming Cai

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Hexokinase 2 discerns a novel circulating tumor cell population associated with poor prognosis in lung cancer patients., Liu Yang, Xiaowei Yan, Jie Chen, Qiong Zhan, Yingqi Hua, Shili Xu, Ziming Li, Zhuo Wang, Yu Dong, Dongqing Zuo, Min Xue, Yin Tang, Harvey R Herschman, Shun Lu, Qihui Shi, and Wei Wei

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A DNA methylation clock associated with age-related illnesses and mortality is accelerated in men with combat PTSD., Ruoting Yang, Gwyneth W Y Wu, Josine E Verhoeven, Aarti Gautam, Victor I Reus, Jee In Kang, Janine D Flory, Duna Abu-Amara, PTSD Systems Biology Consortium, Leroy Hood, Francis J Doyle, Rachel Yehuda, Charles R Marmar, Marti Jett, Rasha Hammamieh, Synthia H Mellon, and Owen M Wolkowitz

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Racial, Ethnic, and Sex Disparities in Patients With STEMI and Cardiogenic Shock., Lina Ya'qoub, Alejandro Lemor, Mohammed Dabbagh, William O'Neill, Akshay Khandelwal, Sara C Martinez, Nasrien E Ibrahim, Cindy Grines, Michelle Voeltz, and Mir B Basir

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Ganitumab and metformin plus standard neoadjuvant therapy in stage 2/3 breast cancer., Douglas Yee, Claudine Isaacs, Denise M Wolf, Christina Yau, Paul Haluska, Karthik V Giridhar, Andres Forero-Torres, A Jo Chien, Anne M Wallace, Lajos Pusztai, Kathy S Albain, Erin D Ellis, Heather Beckwith, Barbara B Haley, Anthony D Elias, Judy C Boughey, Kathleen Kemmer, Rachel L Yung, Paula R Pohlmann, Debu Tripathy, Amy S Clark, Hyo S Han, Rita Nanda, Qamar J Khan, Kristen K Edmiston, Emanuel F Petricoin, Erica Stringer-Reasor, Carla I Falkson, Melanie Majure, Rita A Mukhtar, Teresa L Helsten, Stacy L Moulder, Patricia A Robinson, Julia D Wulfkuhle, Lamorna Brown-Swigart, Meredith Buxton, Julia L Clennell, Melissa Paoloni, Ashish Sanil, Scott Berry, Smita M Asare, Amy Wilson, Gillian L Hirst, Ruby Singhrao, Adam L Asare, Jeffrey B Matthews, Nola M Hylton, Angela DeMichele, Michelle Melisko, Jane Perlmutter, Hope S Rugo, W Fraser Symmans, Laura J Van't Veer, Donald A Berry, and Laura J Esserman

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Adjuvant Radiation Field Extent and Sites of Failure in Node Positive Endometrioid Endometrial Cancer., D Yerramilli, Y H Chen, V Venkatachalam, G M Alban, D L Buscariollo, T Cheng, M King, J Pretz, A L Russo, and L J Lee

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What Are Risk Factors for an Ileus After Posterior Spine Surgery?-A Case Control Study., Emre Yilmaz, Eric Benca, Akil P Patel, Sarah Hopkins, Ronen Blecher, Amir Abdul-Jabbar, Thomas M O'Lynnger, Rod J Oskouian, Daniel C Norvell, and Jens R Chapman

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Cardiovascular Procedural Deferral and Outcomes over COVID-19 Pandemic Phases: A Multi-Center Study., Celina M Yong, Kateri J Spinelli, Shih Ting Chiu, Brandon Jones, Brian Penny, Santosh Gummidipundi, Shire Beach, Alex Perino, Mintu Turakhia, Paul Heidenreich, and Ty J Gluckman

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Comorbid illnesses are associated with altered adaptive immune responses to SARS-CoV-2., Krystle Kq Yu, Stephanie Fischinger, Malisa T Smith, Caroline Atyeo, Deniz Cizmeci, Caitlin R Wolf, Erik D Layton, Jennifer K Logue, Melissa S Aguilar, Kiel Shuey, Carolin Loos, Jingyou Yu, Nicholas M Franko, Robert Y Choi, Anna Wald, Dan H Barouch, David M Koelle, Douglas Lauffenburger, Helen Y Chu, Galit Alter, and Chetan Seshadri

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Spatio-temporal hybrid neural networks reduce erroneous human "judgement calls" in the diagnosis of Takotsubo syndrome., Fahim Zaman, Rakesh Ponnapureddy, Yi Grace Wang, Amanda Chang, Linda M Cadaret, Ahmed Abdelhamid, Shubha D Roy, Majesh Makan, Ruihai Zhou, Manju B Jayanna, Eric Gnall, Xuming Dai, Avneet Singh, Jingsheng Zheng, Venkata S Boppana, Feng Wang, Pahul Singh, Xiaodong Wu, and Kan Liu

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Autopopulus: A Novel Framework for Autoencoder Imputation on Large Clinical Datasets., Davina J Zamanzadeh, Panayiotis Petousis, Tyler A Davis, Susanne B Nicholas, Keith C Norris, Katherine Tuttle, Alex A T Bui, and Majid Sarrafzadeh

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APOL1 genotype-associated morphologic changes among patients with focal segmental glomerulosclerosis., Jarcy Zee, Michelle T McNulty, Jeffrey B Hodgin, Olga Zhdanova, Sangeeta Hingorani, Jonathan Ashley Jefferson, Keisha L Gibson, Howard Trachtman, Alessia Fornoni, Katherine M Dell, Heather N Reich, Serena Bagnasco, Larry A Greenbaum, Richard A Lafayette, Debbie S Gipson, Elizabeth Brown, Matthias Kretzler, Gerald Appel, Kamalanathan K Sambandam, Katherine Tuttle, Dhruti Chen, Meredith A Atkinson, Marie C Hogan, Frederick J Kaskel, Kevin E Meyers, John O'Toole, Tarak Srivastava, Christine B Sethna, Michelle A Hladunewich, J J Lin, Cynthia C Nast, Vimal K Derebail, Jiten Patel, Suzanne Vento, Lawrence B Holzman, Ambarish M Athavale, Sharon G Adler, Kevin V Lemley, John C Lieske, Jonathan J Hogan, Crystal A Gadegbeku, Fernando C Fervenza, Chia-Shi Wang, Raed Bou Matar, Pamela Singer, Jeffrey B Kopp, Laura Barisoni, and Matthew G Sampson

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Lung proteomic biomarkers associated with chronic obstructive pulmonary disease., Yu-Hang Zhang, Michael R Hoopmann, Peter J Castaldi, Kirsten Simonsen, Mukul K Midha, Michael H Cho, Gerard J Criner, Raphael Bueno, Jiangyuan Liu, Robert L Moritz, and Edwin K Silverman

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Multi-cohort analysis of host immune response identifies conserved protective and detrimental modules associated with severity across viruses., Hong Zheng, Aditya M Rao, Denis Dermadi, Jiaying Toh, Lara Murphy Jones, Michele Donato, Yiran Liu, Yapeng Su, Cheng L Dai, Sergey A Kornilov, Minas Karagiannis, Theodoros Marantos, Yehudit Hasin-Brumshtein, Yudong D He, Evangelos J Giamarellos-Bourboulis, James R Heath, and Purvesh Khatri

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Glucose-Dementia Association Is Consistent Over Blood Pressure/Antihypertensive Groups., Jing Zhou, Rod L Walker, Shelly L Gray, Zachary A Marcum, Douglas Barthold, James D Bowen, Wayne McCormick, Susan M McCurry, Eric B Larson, and Paul K Crane

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The geometry of clinical labs and wellness states from deeply phenotyped humans., Anat Zimmer, Yael Korem, Noa Rappaport, Tomasz Wilmanski, Priyanka Baloni, Kathleen Jade, Max Robinson, Andrew T Magis, Jennifer Lovejoy, Sean M Gibbons, Leroy Hood, and Nathan D Price

Submissions from 2020

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A high-stringency blueprint of the human proteome., Subash Adhikari, Edouard C Nice, Eric W Deutsch, Lydie Lane, Gilbert S Omenn, Stephen R Pennington, Young-Ki Paik, Christopher M Overall, Fernando J Corrales, Ileana M Cristea, Jennifer E Van Eyk, Mathias Uhlén, Cecilia Lindskog, Daniel W Chan, Amos Bairoch, James C Waddington, Joshua L Justice, Joshua LaBaer, Henry Rodriguez, Fuchu He, Markus Kostrzewa, Peipei Ping, Rebekah L Gundry, Peter Stewart, Sanjeeva Srivastava, Sudhir Srivastava, Fabio C S Nogueira, Gilberto B Domont, Yves Vandenbrouck, Maggie P Y Lam, Sara Wennersten, Juan Antonio Vizcaino, Marc Wilkins, Jochen M Schwenk, Emma Lundberg, Nuno Bandeira, Gyorgy Marko-Varga, Susan T Weintraub, Charles Pineau, Ulrike Kusebauch, Robert L Moritz, Seong Beom Ahn, Magnus Palmblad, Michael P Snyder, Ruedi Aebersold, and Mark S Baker

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A Near-Optimal Control Method for Stochastic Boolean Networks., Boris Aguilar, Pan Fang, Reinhard Laubenbacher, and David Murrugarra

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A generalizable data-driven multicellular model of pancreatic ductal adenocarcinoma., Boris Aguilar, David L Gibbs, David J Reiss, Mark McConnell, Samuel A Danziger, Andrew Dervan, Matthew Trotter, Douglas Bassett, Robert Hershberg, Alexander V Ratushny, and Ilya Shmulevich

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Type 1 interferon-dependent repression of NLRC4 and iPLA2 licenses down-regulation of, Ajay Suresh Akhade, Shaikh M Atif, Bhavana S Lakshmi, Neha Dikshit, Kelly T Hughes, Ayub Qadri, and Naeha Subramanian

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The Proteasome Activators Blm10/PA200 Enhance the Proteasomal Degradation of N-Terminal Huntingtin., Azzam Aladdin, Yanhua Yao, Ciyu Yang, Günther Kahlert, Marvi Ghani, Nikolett Király, Anita Boratkó, Karen Uray, Gunnar Dittmar, and Krisztina Tar

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Inference of Bacterial Small RNA Regulatory Networks and Integration with Transcription Factor-Driven Regulatory Networks., Mario L Arrieta-Ortiz, Christoph Hafemeister, Bentley Shuster, Nitin Baliga, Richard Bonneau, and Patrick Eichenberger

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Acalabrutinib Plus RICE Followed By Autologous Hematopoietic Cell Transplantation and/or Acalabrutinib Maintenance Therapy for Patients with Relapsed/Refractory Diffuse Large B-Cell Lymphoma, Neil Bailey, Tenzin Tsomo, Jennie Szeto, William Bensinger, Daniel N Egan, Livia Hegerova, Raya Mawad, Ami Batchelder, Joanna Fesler, Heather Holdread, Sonia Glennie, Judson Hall, Joseph Ferry, Megumi Bailey, David Kane, John M Pagel, and Krish Patel

Patients with ineffective esophageal motility undergoing magnetic sphincter augmentation demonstrate outcomes similar to patients with normal esophageal motility, GN Baison, AS Jackson, CL Wilshire, P Jackson, BA Jobe, V Lazzari, L Bonavina, R Heidrick, RCW Bell, SF Schopmann, CP Dunn, JC Lipham, CM Dunst, and See additional authors in comments

Patients with ineffective esophageal motility undergoing magnetic sphincter augmentation demonstrate outcomes similar to patients with normal esophageal motility, GN Baison, AS Jackson, CL Wilshire, P Jackson, BA Jobe, V Lazzari, L Bonavina, R Heidrick, RCW Bell, SF Schopmann, CP Dunn, JC Lipham, CM Dunst, and See additional authors in comments

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Identifying Personalized Metabolic Signatures in Breast Cancer., Priyanka Baloni, Wikum Dinalankara, John C Earls, Theo A Knijnenburg, Donald Geman, Luigi Marchionni, and Nathan D Price

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Metabolic Network Analysis Reveals Altered Bile Acid Synthesis and Metabolism in Alzheimer's Disease., Priyanka Baloni, Cory C Funk, Jingwen Yan, James T Yurkovich, Alexandra Kueider-Paisley, Kwangsik Nho, Almut Heinken, Wei Jia, Siamak Mahmoudiandehkordi, Gregory Louie, Andrew J Saykin, Matthias Arnold, Gabi Kastenmüller, William J Griffiths, Ines Thiele, Alzheimer’s Disease Metabolomics Consortium, Rima Kaddurah-Daouk, and Nathan D Price

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Minimally invasive sigmoidectomy for diverticular disease decreases inpatient opioid use: Results of a propensity score-matched study., Amir Bastawrous, I-Fan Shih, Yanli Li, and Robert K Cleary

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Planting the Seeds of Health and Resilience, Shawna Beese, Teresa Bigand, and Marian L. Wilson

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Position statement on priorities for artificial intelligence in GI endoscopy: a report by the ASGE Task Force., Tyler M Berzin, Sravanthi Parasa, Michael B Wallace, Seth A Gross, Alessandro Repici, and Prateek Sharma

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Salvage Lung Resections After Definitive Chemoradiotherapy: A Safe and Effective Oncologic Option., Adam J Bograd, Catherine Mann, Jed A Gorden, Christopher R Gilbert, Alexander S Farivar, Ralph W Aye, Brian Louie, and Eric Vallières

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Surgery as a Component of Multimodality Care for Known Stage IIIA-N2 Non-small Cell Lung Cancer., Adam J Bograd and Eric Vallières

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Integrative network modeling reveals mechanisms underlying T cell exhaustion., Hamid Bolouri, Mary Young, Joshua Beilke, Rebecca Johnson, Brian Fox, Lu Huang, Cristina Costa Santini, Christopher Mark Hill, Anne-Renee van der Vuurst de Vries, Paul Shannon, Andrew Dervan, Pallavur Sivakumar, Matthew Trotter, Douglas Bassett, and Alexander Ratushny

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Comment on: Systematic review of the introduction and evaluation of magnetic augmentation of the lower oesophageal sphincter for gastro-oesophageal reflux disease., L Bonavina, N Boyle, C Dunn, T Horbach, T B Knowles, J C Lipham, Brian Louie, S Markar, S F Schppmann, and J Zehetner

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Visualizing metabolic network dynamics through time-series metabolomic data., Lea F Buchweitz, James T Yurkovich, Christoph Blessing, Veronika Kohler, Fabian Schwarzkopf, Zachary A King, Laurence Yang, Freyr Jóhannsson, Ólafur E Sigurjónsson, Óttar Rolfsson, Julian Heinrich, and Andreas Dräger

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Rib Plating Offers Favorable Outcomes in Patients With Chronic Nonunion of Prior Rib Fractures., Kerrie E Buehler, Candice Wilshire, Adam J Bograd, and Eric Vallieres

Imaging center administrators report a lack of physician champion and resources for follow-up as barriers to lung cancer screening implementation in a community-based healthcare network The American Thoracic Society Philadelphia, Pennsylvania, KE Buehler, CL Wilshire, and See all authors in comments

In the last month of life the majority of patients with stage IV non-small cell lung cancer experience in-hospital days and in-hospital death The American Thoracic Society Philadelphia, Pennsylvania, KE Buehler, CL Wilshire, and See all authors in comments